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Pull requests: galaxyproject/iwc

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Pull requests list

Updating workflows/transcriptomics/rnaseq-de from 0.5 to 0.6
#1059 opened Dec 22, 2025 by gxydevbot Loading…
1
Updating workflows/amplicon/dada2 from 0.3 to 0.4
#1058 opened Dec 22, 2025 by gxydevbot Loading…
Add species distribution EBV workflow
#1055 opened Dec 19, 2025 by mo-mahe Loading…
Add 'cgMLST of Bacterial Genome' workflow
#1054 opened Dec 17, 2025 by clsiguret • Draft
3 of 12 tasks
2
Add ecology "pool of amplicons map to reference" workflow
#1053 opened Dec 16, 2025 by mo-mahe Loading…
23
Updating workflows/metabolomics/qcxms-sdf from 0.1 to 0.2
#1052 opened Dec 15, 2025 by gxydevbot Loading…
Updating workflows/scRNAseq/scanpy-clustering from 0.1 to 0.2
#1051 opened Dec 10, 2025 by gxydevbot Loading…
1
Updating workflows/microbiome/metagenomic-genes-catalogue from 1.1 to 1.2
#1050 opened Dec 10, 2025 by gxydevbot Loading…
Updating workflows/genome_annotation/annotation-braker3 from 0.1 to 0.2
#1049 opened Dec 10, 2025 by gxydevbot Loading…
1
Updating workflows/bacterial_genomics/amr_gene_detection from 1.1.7 to 1.1.8
#1048 opened Dec 10, 2025 by gxydevbot Loading…
Updating workflows/VGP-assembly-v2/kmer-profiling-hifi-VGP1 from 0.7 to 0.8
#1047 opened Dec 10, 2025 by gxydevbot Loading…
Updating workflows/VGP-assembly-v2/Assembly-Hifi-HiC-phasing-VGP4 from 0.5 to 0.6
#1046 opened Dec 10, 2025 by gxydevbot Loading…
1
Updating workflows/virology/generic-non-segmented-viral-variant-calling from 0.2 to 0.3
#1042 opened Dec 8, 2025 by gxydevbot Loading…
Updating workflows/sars-cov-2-variant-calling/sars-cov-2-consensus-from-variation from 0.4.3 to 0.4.4
#1041 opened Dec 8, 2025 by gxydevbot Loading…
1
Updating workflows/microbiome/mags-building from 0.4 to 0.5
#1026 opened Nov 24, 2025 by gxydevbot Loading…
1
Updating workflows/epigenetics/chipseq-sr from 1.0 to 1.1
#1019 opened Nov 10, 2025 by gxydevbot Loading…
1
Updating workflows/epigenetics/chipseq-pe from 1.0 to 1.1
#1018 opened Nov 10, 2025 by gxydevbot Loading…
1
Updating workflows/VGP-assembly-v2/kmer-profiling-hifi-trio-VGP2 from 0.1.6 to 0.1.7
#1017 opened Nov 10, 2025 by gxydevbot Loading…
6
Metagenomic raw reads analysis workflow without assembly
#1014 opened Nov 3, 2025 by hugolefeuvre Loading…
3 of 12 tasks
114
new workflow for downloading ena data
#1009 opened Oct 29, 2025 by nekrut Loading…
11 of 12 tasks
@mvdbeek
Add simple diploid variant calling workflow
#1005 opened Oct 25, 2025 by mvdbeek Loading…
12 tasks
@nekrut
4
Updating workflows/virology/pox-virus-amplicon from 0.4 to 0.5
#994 opened Oct 13, 2025 by gxydevbot Loading…
3
Updating workflows/scRNAseq/fastq-to-matrix-10x from 0.6.3 to 0.6.4
#993 opened Oct 13, 2025 by gxydevbot Loading…
Updating workflows/scRNAseq/velocyto from 0.2 to 0.3
#986 opened Oct 8, 2025 by gxydevbot Loading…
Updating workflows/metabolomics/lcms-preprocessing from 1.1 to 1.2
#984 opened Oct 8, 2025 by gxydevbot Loading…
1
ProTip! What’s not been updated in a month: updated:<2025-12-03.